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Genetic Divergence and Selection of Common Bean Genotypes with High Agronomic Performance in Mozambique

Author or Institution as Author
J. Dique
Co-authors

C. Pedro, C. Fernando, G. Silota, L. Savanguane, L. Bungala, P. Manhoca, A. Charimba, M. Miguel, M. Quinhentos, D. Dias, V. Carneiro

Date of publication
Edition or Version
1.00
Institution
Agricultural Research Institute of Mozambique and others
File format
Language
Gender marker
Youth marker
Description/Abstract

The deep knowledge of genetic diversity in access, in the breeding program, and the contribution of genetic factors as well as the phenotypic expression is of extreme importance for the development of new cultivars and maintenance of the program. This research aimed to study the genetic diversity and selection of the best common bean genotypes with high agronomic performance in the Agrarian Station of Sussundenga-Mozambique. Twenty-two common bean genotypes were evaluated in a randomized block design with three repetitions in the 2021/2022 agricultural season. The agronomic characteristics evaluated were: the number of days to flowering, plant height, plant architecture, number of pods per plant, the weight of 100 seeds, and grain yield. The data obtained were submitted to individual variance analysis, followed by the Scott-Knott grouping test. For the effect of genetic divergence between the genotypes, multivariate analysis was used based on the generalized Mahalanobis distance and Tocher optimization method, UPGMA, and canonical variables for the projection of distance in the 2D plane. It was also verified by the Cophenetic Correlation Coefficient. The Singh criterion (1981) was used, indicating the characteristics Number of pods per plant (42.81%), the weight of 100 seeds (19.59%), and Plant height (16.08%) as the most important for the genetic divergence of bean genotypes.

Other Partners

Univesridade Federal de Lavras, Departamento da Biologia, Instituto de Ciênciaas Naturais

Keywords
Phaseolus vulgaris L. UPGMA, generalized Mahalanobis distance.
Contact name (for further information)
J. Dique
Contact email (for further information)
Contact institution (for further information)
Agricultural Research Institute of Mozambique
Citation

Dique, J., Pedro C., Fernando, C., Silota, G., Savanguane, L., Bungala, L., Manhoca, P., Charimba, A., Miguel, M., Quinhentos, M., Dias, D., Carneiro, V. (2022. Genetic Divergence and Selection of Common Bean Genotypes with High Agronomic Performance in Mozambique. Journal of Agriculture, Food and Environment (JAFE). Vol 3 No 4 December 2022 Pages 27-33 e-ISSN 2708-5694

CCARDESA Category

Satellite Data for Improved Monitoring of Farm Productivity and Early Warning Systems in Botswana

Content Type
Author or Institution as Author
Joshua Sikhu Okonya
Co-authors

Enock Warinda, Moses Odeke, Baitsi Podisi, Futhi Magagula, Cliff Sibusiso Dlamini, Andrew Farrow, Felicia O. Akinyemi, Reason L. Machete, Benedict Kayombo, Joseph Tuyishimire, Kenneth Mubea, & Wellington Michael

Date of publication
Institution
Digital Earth Africa
Language
Description/Abstract

Despite the adaptation and mitigation measures that have been put in place to counter the negative effects of climate change and food insecurity, more than 57.8 million people in the Southern African Development Community (SADC) population need food assistance in 2023 due to poor harvests (APA 2023). In Botswana, alone, close to 37,000 people need food assistance (FAO, 2022). This comes against the backdrop of declining agricultural productivity attributed to several factors including high cost of inputs, high incidence of pests and diseases, low input use and extreme weather conditions such as droughts, floods, and erratic rainfalls (FAO 2022).

Keywords
Satellite Data, Climatic Shocks, Adaptation, Mitigation, Limited technical capacity, science-policy
Contact name (for further information)
Joshua Sikhu Okonya
Contact email (for further information)
Contact institution (for further information)
Association for Strengthening Agricultural Research in Eastern and Central Africa (ASARECA)
Citation

Okonya, J.S. Warinda, E. Odeke, M. Podisi, B. Magagula, F. Dlamini, C. S.  Farrow, A. Akinyemi, F.O. Machete, R.L. Kayombo, B. Tuyishimire, J. Mubea, K. & Michael, W. (2023). Satellite Data for Improved Monitoring of Farm Productivity and Early Warning Systems in Botswana. Policy Brief Botswana, June 2023.

CCARDESA Category

Regional Multi-stakeholder Dialogue on Vulnerable Farmers’ Access to Fertilisers Report

Content Type
Author or Institution as Author
CCARDESA
Funding Partner
Date of publication
Edition or Version
1.00
Institution
CCARDESA
File format
Language
Gender marker
Youth marker
Description/Abstract

The Centre for Coordination of Agricultural Research and Development for Southern Africa (CCARDESA) in collaboration with the Food and Agriculture Organization of the United Nations (FAO), organized a Regional Multi-stakeholder Dialogue event on Vulnerable Farmers’ Access to Fertilizer from 4th to 6th October 2022 in Mbabane, Eswatini.

Keywords
Regional Multi-stakeholder Dialogue on Vulnerable Farmers’ Access to Fertilisers: Sharing Good Practices, Innovations and Viable Options.
Contact name (for further information)
Dr Baitsi Podisi
Contact email (for further information)
Contact institution (for further information)
CCARDESA
Citation

CCARDESA,2022,Regional Multi-stakeholder Dialogueon Vulnerable Farmers’ Access to Fertilisers: Sharing Good Practices, Innovations and Viable Options.Pg.15, Gaborone-Botswana

CCARDESA Category

Sorghum Production in Northern Namibia: Farmers’ Perceived Constraints and Trait Preferences

Content Type
Author or Institution as Author
Wanga, M.A.
Co-authors

Shemelis, H. and Mengistu, G.

Date of publication
Edition or Version
1.00
Institution
MDPI
Language
Gender marker
Youth marker
Description/Abstract

Sorghum (Sorghum bicolor [L.] Moench) is a valuable crop in the dry regions of the world, including Namibia. Due to the intensity and recurrence of drought and heat stress in the traditional sorghum growing areas, there is a need to breed and deploy new generation farmer-preferred and climate-smart cultivars to serve the diverse value chains. Therefore, the objectives of this study were to assess the present state of sorghum production in northern Namibia and document farmers’ perceived production constraints and trait preferences in new varieties to guide drought-tolerance breeding. A survey was conducted using a participatory rural appraisal in the following six selected sorghum-growing constituencies in Namibia: Kapako and Mpungu (Kavango West Region), Eenhana and Endola (Ohangwena Region), and Katima Mulilo Rural and Kongola (Zambezi Region). Data were collected using a structured questionnaire involving 198 farmers in 14 sampled villages across the regions. Results revealed variable trends in sorghum production among respondent farmers when disaggregated by gender, age, number of households, education level, cropping systems, types of varieties grown, and perceived production constraints. An equal proportion of male and female respondent farmers cultivate sorghum, suggesting the value of the crop to both genders in Namibia. Most respondent farmers (63.6%) were in productive age groups of <40 years old. In the study areas, low-yielding landrace varieties, namely Ekoko, Okambete, Makonga, Kamburo, Nkutji, Katoma, Fuba, Dommy, Kawumbe, and Okatombo, were widely cultivated, and most of the farmers did not use chemical fertilizers to cultivate sorghum. Farmers’ perceived sorghum production constraints in the study areas included recurrent drought, declining soil fertility, insect pest damage, high cost of production inputs, unavailability of improved seed, lack of alternative improved varieties with farmers’ preferred traits, lack of organic manure, limited access to market and limited extension service. The key farmers’ preferred traits in a new sorghum variety included high grain yield, early maturity, and tolerance to drought, in the field and storage insect pests. The study recommends genetic improvement and new variety deployment of sorghum with the described farmers-preferred traits to increase the sustainable production of the crop in Namibia.

Keywords
farmer-preferred traits; Namibia; participatory rural appraisal; sorghum breeding;
production challenges
Contact name (for further information)
Wanga, M.A.
Contact email (for further information)
Contact institution (for further information)
Directorate of Agricultural Research and Development, Ministry of Agriculture, Water and Land Reform- Namibia
Citation

Wanga, M.A.; Shimelis, H.; Mengistu, G. Sorghum Production in Northern Namibia: Farmers’ Perceived Constraints and Trait Preferences. Sustainability 2022, 14, 10266.

Available at: https://doi.org/10.3390/ su141610266

CCARDESA Category

Genotype by environment interaction of newly developed sorghum lines in Namibia

Content Type
Author or Institution as Author
Wanga, M.A.
Co-authors

Shimelis, H. and Mashilo, J.

Date of publication
Edition or Version
1.00
Institution
Springer
Language
Gender marker
Youth marker
Description/Abstract

The magnitude of genotype by environment interaction (GEI) is crucial for selecting high performing and adapted genotypes for targeted breeding. The aim of the study was to determine GEI of newly-developed mutant and traditional sorghum lines for grain yield and yield related traits for drought-prone areas of Namibia. Fifty sorghum genotypes were evaluated under feld conditions using a 10×5 alpha lattice design with three replications. The experiments were carried out in four environments with two growing seasons in Namibia. Data were collected on grain yield and related traits and subjected to the Additive Main Efects and Multiplicative Interaction (AMMI) model. The AMMI model showed that 93.9% of the total genetic variation was attributed to days to 50% fowering (DF), while 94.04% of the variation was due to plant height (PH), 86.52%  to panicle weight (PW), 70.67% to thousand-grain weight (TGW), and 90.68% to grain yield (GY). The larger variations attributed to genotypic efects for PL (36.3%), TGW (33.2%) and PH (20.7%) are useful for genotype selection for yield related traits. Based on a multi-trait biplot and Best Linear Unbiased Prediction (BLUPs) analyses of the GEI data across all drought-prone testing environments, the medium maturity mutant line designated as L7P9-13 was selected as the best yielding (2 tons/ha) and recommended for drought-prone area of Namibia

Keywords
AMMI · BLUEs · BLUPs · Drought tolerance, mutation breeding · Sorghum
Contact name (for further information)
Wanga, M.A.
Contact email (for further information)
Contact institution (for further information)
African Centre for Crop Improvement, School of Agricultural, Earth and Environmental Sciences, University of KwaZulu-Natal, South Africa
Citation

Wanga, M.A., Shimelis, H. and Mashilo, J. (2022). Genotype by environment interaction of newly developed sorghum lines in Namibia. Euphytica (2022) 218:147

Available at: https://doi.org/10.1007/s10681-022-03099-5

CCARDESA Category

Genetic diversity in sorghum [Sorghum bicolor (L.) Moench] germplasm from Southern Africa as revealed by microsatellite markers and agro-morphological traits

Content Type
Author or Institution as Author
Motlhaodi, T.
Co-authors

Geleta, M., Chite, S., Fatih, M., Ortiz, R. and Bryngelsson, T.

Date of publication
Edition or Version
1.00
Institution
Springer
Language
Gender marker
Youth marker
Description/Abstract

Cultivated sorghum [Sorghum bicolor (L.) Moench] is an important food security crop in the semi-arid regions of the world including Asia and Africa. Its genetic diversity is contained mostly in traditional varieties and modern cultivars used by farmers. In this study, agro-morphological traits and molecular markers were used to assess genetic diversity in 22 accessions of cultivated sorghum from five countries (Botswana, Namibia, Swaziland, Zambia and Zimbabwe) in the Southern African Development Community (SADC) region. The study revealed a significant variation among 22 accessions in both qualitative and quantitative morphological traits, indicating the accessions’ promising potential as breeding material. For molecular analysis, 11 microsatellite primer-pairs were used, and generated a total of 70 alleles across 20 accessions. Analysis of molecular variance revealed a high level of genetic variation; 67 % among the accessions and 10 % among the five countries. The patterns of genetic diversity and the relationships observed in this study should provide insights for genetic resource conservation and utilization of sorghum germplasm in the SADC region.

Keywords
Accessions, Agro-morphological traits, Genetic variation, Microsatellites, Sorghum bicolor
Contact name (for further information)
Motlhaodi, T.
Contact email (for further information)
Contact institution (for further information)
Department of Plant Breeding, Swedish University of Agricultural Sciences- Sweden
Citation

Motlhaodi, T., Geleta, M., Chite, S., Fatih, M., Ortiz, R. and Bryngelsson, T. (2016). Genetic diversity in sorghum [Sorghum bicolor (L.) Moench] germplasm from Southern Africa as revealed by microsatellite markers and agro-morphological traits. Genet Resour Crop Evol (2017) 64:599–610. 

CCARDESA Category

SSR marker development, genetic diversity and population structure analysis of Bambara groundnut [Vigna subterranea (L.) Verdc.] landraces

Content Type
Author or Institution as Author
Molosiwa, O.O.
Co-authors

Aliyu, S., Stadler, F., MAyes, K., Massawe, F., Kilian, A., and Mayes, S.

Date of publication
Edition or Version
1.00
Institution
Springer
Language
Gender marker
Youth marker
Description/Abstract

We report here the development of 75 SSR markers for Bambara groundnut through various sequencing approaches and the subsequent utilization of these SSR markers and other marker types (DArT Arrays) for the analysis of genetic diversity, population structure and the selection of pure lines from landraces. To assess the level of genetic diversity in Bambara groundnut landrace collections, 68 and 201 polymorphic SSR and DArT markers, respectively, were assayed against 24 single individual seed from a core collection of landraces. Polymorphic information content (PIC) ranged from 0.08 to 0.89 with an average of 0.42 across all SSR polymorphic markers, with observed (Ho) and expected (He) heterozygosity of 0.01 and 0.5 respectively. For the population structure analysis, 12 SSR markers selected as highly polymorphic from the initial screen were assayed against 123 landrace accessions. The average PIC across the 12 SSR was 0.66 with an average Ho of 0.02 and an inbreeding coefficient (f) of 0.98, suggesting that seed derived from a single plant essentially represents an unselected variety. Based on the low level of Ho and high f observed in the landrace samples, a subset of 35 genotypes derived from the landraces were advanced for field trials in Botswana and scored for 37 phenotypic traits. These 35 individual genotypes were ranked for agronomic performance based on yield component factors and other qualitative traits after field evaluation. Five genotypes with good yield potential and adaptability were recommended as potential varieties for Botswanan agro-ecology.

Keywords
Bambara groundnut, Landraces, Genetic diversity, Population structure, Pre-breeding, Vigna subterranea
Contact name (for further information)
Molosiwa, O.O.
Contact email (for further information)
Contact institution (for further information)
School of Biosciences, The University of Nottingham, Sutton Bonington Campus, Loughborough, Leicestershire- UK
Citation

Molosiwa, O.O., Aliyu, S., Stadler, F., MAyes, K., Massawe, F., Kilian, A., and Mayes, S. (2015). SSR marker development, genetic diversity and population structure analysis of Bambara groundnut [Vigna subterranea (L.) Verdc.] landraces. Genet Resour Crop Evol (2015) 62:1225–1243

Available at: 10.1007/s10722-015-0226-6

CCARDESA Category

Sorghum in dryland: morphological, physiological, and molecular responses of sorghum under drought stress

Content Type
Author or Institution as Author
Abreha, K.B.
Co-authors

Enyew, M., Carlsson, A.S., Vetukuri, R.R., Feyissa, T., Motlhaodi, T., Ng'uni, D. and Geleta, M.

Date of publication
Edition or Version
1.00
Institution
Springer
Language
Gender marker
Youth marker
Description/Abstract

Sorghum is an economically important and a staple food crop for over half a billion people in developing countries, mostly in arid and semi-arid regions where drought stress is a major limiting factor. Although sorghum is generally considered tolerant, drought stress still signifcantly hampers its productivity and nutritional quality across its major cultivation areas. Hence, understanding both the efects of the stress and plant response is indispensable for improving drought tolerance of the crop. This review aimed at enhancing our understanding and provide more insights on drought tolerance in sorghum as a contribution to the development of climate resilient sorghum cultivars. We summarized fndings on the efects of drought on the growth and development of sorghum including osmotic potential that impedes germination process and embryonic structures, photosynthetic rates, and imbalance in source-sink relations that in turn afect seed flling often manifested in the form of substantial reduction in grain yield and quality. Mechanisms of sorghum response to drought-stress involving morphological, physiological, and molecular alterations are presented. We highlighted the current understanding about the genetic basis of drought tolerance in sorghum, which is important for maximizing utilization of its germplasm for development of improved cultivars. Furthermore, we discussed interactions of drought with other abiotic stresses and biotic factors, which may increase the vulnerability of the crop or enhance its tolerance to drought stress. Based on the research reviewed in this article, it appears possible to develop locally adapted cultivars of sorghum that are drought tolerant and nutrient rich using modern plant breeding techniques.

Keywords
Drought tolerance · Germplasm · Grain quality · Sorghum · Source-sink relations
Contact name (for further information)
Abreha, K.B.
Contact email (for further information)
Contact institution (for further information)
Department of Plant Breeding, Swedish University of Agricultural Sciences, Box 190, 234 22 Lomma, Sweden
Citation

Abreha, K.B., Enyew, M., Carlsson, A.S., Vetukuri, R.R., Feyissa, T., Motlhaodi, T., Ng'uni, D. and Geleta, M. (2021). Sorghum in dryland: morphological, physiological, and molecular responses of sorghum under drought stress. Planta (2022) 255:20. Available at: https://doi.org/10.1007/s00425-021-03799-7

CCARDESA Category
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Funding Partners

4.61M

Beneficiaries Reached

97000

Farmers Trained

3720

Number of Value Chain Actors Accessing CSA

41300

Lead Farmers Supported